[Slackbuilds-users] openmpi request
Emmanuel
emmanueln at gmail.com
Thu Jul 25 13:58:38 UTC 2019
On Thu, Jul 25, 2019 at 5:04 AM Robby Workman <rworkman at slackbuilds.org>
wrote:
> On Thu, 25 Jul 2019 09:58:03 +0200
> Karel Venken <kava0418 at online.be> wrote:
>
> > Hi,
> >
> > For installing our cluster we need to add to the openmpi.Slackbuilds
> > with --with-pmi=pmi2 configure option. So it becomes:
> >
> > ./configure \
> > --prefix=/usr \
> > --sysconfdir=/etc \
> > --localstatedir=/var/lib \
> > --mandir=/usr/man/ \
> > --enable-mpi1-compability \
> > --docdir=/usr/doc/$PRGNAM-$VERSION \
> > --disable-static \
> > --libdir=/usr/lib${LIBDIRSUFFIX} \
> > --build=$ARCH-slackware-linux \
> > --with-pmi=pmi2
> >
> >
> > The background is to use mpi with slurm and a NUMA kernel - we build
> > it ourself. Without this parameter openmpi crashes. Would this be an
> > option?
>
>
> CCing SBo maintainer of openmpi; if there's no response and/or an
> update with that fixed within a few weeks, follow up with us and
> we'll handle it directly.
>
> -RW
>
Hi Karel,
I'm the maintainer of openmpi and slurm, let me try this parameter in my
cluster because we haven't had issues with the current package and slurm
(and also with several versions of openmpi, 1.8.x, 1.10.x, 2.1.1). Can you
send me the exact error? Have you modified the slurm build script to add
--with-pmi? are you running mpirun in the slurm submit job script or srun?
In any case, I will submit a new version of the script in the next few
days.
Best regards and thanks for reporting the issue :-)
--
*****************
Emmanuel
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