[Slackbuilds-users] hdf5 version 1.12.2 -vs- version 1.10.6

[Konrad J Hambrick]

Greg --

Yes, that was it ( netcdf -- see above ) !

I've got some rebuilding to do this morning :)

-- kjh

On Sat, Oct 29, 2022 at 7:34 AM Konrad J Hambrick <kjhambrick at gmail.com>
wrote:

> marav --
>
> Thanks a zillion !
>
> I also have gdal optional REQUIRE netcdf installed and netcdf also
> REQUIRES hdf5.
>
> gdal was failing when it 'hit' netcdf with the unresolved hdf5.so.200 !
>
> Thanks again !
>
> -- kjh
>
> On Sat, Oct 29, 2022 at 7:06 AM Konrad J Hambrick <kjhambrick at gmail.com>
> wrote:
>
>> Well, dang.
>>
>> I've got some research to do.
>>
>> Thanks marav !
>>
>> -- kjh
>>
>> On Sat, Oct 29, 2022 at 6:48 AM marav <marav8 at free.fr> wrote:
>>
>>> Hi Konrad,
>>>
>>> gdal builds fine here, with the latest hdf5 1.12.2
>>>
>>>
>>> *# ls -lhC1 /var/lib/pkgtools/packages | grep hdf5
>>> hdf5-1.12.2-x86_64-1_SBo*
>>>
>>> # ...
>>> ...
>>> *Slackware package /tmp/gdal-3.5.2-x86_64-1_SBo.tgz created.*
>>>
>>> Without any addition
>>>
>>> Cheers
>>> Le 29/10/2022 à 13:09, Konrad J Hambrick a écrit :
>>>
>>> Matteo --
>>>
>>> Several of my SBo's that REQUIRE HDF5 fail to run this morning.
>>>
>>> I believe it's because HDF5 Version 1.12.2 introduced incompatible API
>>> Changes compared to the previous version HDF5 1.10.6
>>>
>>> See this link( HDF5 Version 1.12.2 API Compatibility Macros ):
>>>
>>> Migrating from HDF5 1.10 to HDF5 1.12
>>> <https://portal.hdfgroup.org/display/HDF5/Migrating+from+HDF5+1.10+to+HDF5+1.12>
>>>
>>> One Program is gdal which lists hdf5 as an optional REQUIRE.
>>>
>>> I found an optional 'compatibility' configure option here:
>>>
>>> https://portal.hdfgroup.org/display/HDF5/API+Compatibility+Macros
>>>
>>> So I added:
>>>
>>>     --with-default-api-version=v110
>>>
>>> And I rebuilt HDF5.
>>>
>>> I tried rebuilding gdal ( where hdf5 is an optional REQUIRE ) and it
>>> failed to compile.
>>>
>>> I reverted to hdf5 version 1.10.6 and everything works as expected.
>>>
>>> I am not sure how to proceed because ultimately, proper fixes for all
>>> these SBo Packages will require upstream fixes for the new HDF5 API:
>>>
>>> # hoorex -m hdf5
>>> hdf5 h5utils matio FreeFem openimageio med mpb gmsh netcdf GMT ITK OTB
>>> meep cdo ncview nco paraview Blender grace
>>>
>>> Thanks for all your work !
>>>
>>> -- kjh
>>>
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