<div dir="auto">As soon as the hdf5 update was released, i tested all my packages that use it. All built and tested without any issues.<div dir="auto"><br></div><div dir="auto">With gdal, i would suggest you rebuild all the dependencies in order. With gdal, gdal itself compiles against hdf5, but netcdf also compiles against netcdf. Just like cdo, hdf5 is a direct requirement, as well as an indirect requirement via netcdf.</div><div dir="auto"><br></div><div dir="auto">Hope that makes sense.</div><div dir="auto"><br></div><div dir="auto">Cheers</div><div dir="auto"><br></div><div dir="auto">Greg</div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Sat, 29 Oct 2022, 13:07 Konrad J Hambrick, <<a href="mailto:kjhambrick@gmail.com">kjhambrick@gmail.com</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr"><div class="gmail_default" style="font-family:monospace,monospace">Well, dang.</div><div class="gmail_default" style="font-family:monospace,monospace"><br></div><div class="gmail_default" style="font-family:monospace,monospace">I've got some research to do.</div><div class="gmail_default" style="font-family:monospace,monospace"><br></div><div class="gmail_default" style="font-family:monospace,monospace">Thanks marav !</div><div class="gmail_default" style="font-family:monospace,monospace"><br></div><div class="gmail_default" style="font-family:monospace,monospace">-- kjh</div></div><br><div class="gmail_quote"><div dir="ltr" class="gmail_attr">On Sat, Oct 29, 2022 at 6:48 AM marav <<a href="mailto:marav8@free.fr" target="_blank" rel="noreferrer">marav8@free.fr</a>> wrote:<br></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex">
<div>
<p><font size="4">Hi Konrad,<br>
</font></p>
<p><font size="4">gdal builds fine here, with the latest hdf5 1.12.2</font></p>
<p><b><span style="font-family:monospace"><span style="color:rgb(0,0,0);background-color:rgb(255,255,255)"># ls -lhC1
/var/lib/pkgtools/packages | grep hdf5
<br>
</span><span style="color:rgb(255,84,84);background-color:rgb(255,255,255)">hdf5</span><span style="color:rgb(0,0,0);background-color:rgb(255,255,255)">-1.12.2-x86_64-1_SBo</span></span></b></p>
<pre><span style="font-family:monospace"></span></pre>
<p><span style="font-family:monospace">
</span><span style="font-family:monospace"># ...<br>
...<br>
<b>Slackware package /tmp/gdal-3.5.2-x86_64-1_SBo.tgz created.</b></span></p>
<p><span style="font-family:monospace">Without any addition<br>
</span></p>
<p><span style="font-family:monospace">Cheers<br>
</span><span style="font-family:monospace"></span></p>
<div>Le 29/10/2022 à 13:09, Konrad J
Hambrick a écrit :<br>
</div>
<blockquote type="cite">
<div dir="ltr">
<div class="gmail_default" style="font-family:monospace,monospace">Matteo --</div>
<div class="gmail_default" style="font-family:monospace,monospace"><br>
</div>
<div class="gmail_default" style="font-family:monospace,monospace">Several of my SBo's
that REQUIRE HDF5 fail to run this morning.</div>
<div class="gmail_default" style="font-family:monospace,monospace"><br>
</div>
<div class="gmail_default" style="font-family:monospace,monospace">I believe it's because
HDF5 Version 1.12.2 introduced incompatible API Changes
compared to the previous version HDF5 1.10.6</div>
<div class="gmail_default" style="font-family:monospace,monospace"><br>
</div>
<div class="gmail_default" style="font-family:monospace,monospace">See this link( HDF5
Version 1.12.2 API Compatibility Macros ):</div>
<div class="gmail_default" style="font-family:monospace,monospace"><br>
</div>
<div class="gmail_default" style="font-family:monospace,monospace"><a href="https://portal.hdfgroup.org/display/HDF5/Migrating+from+HDF5+1.10+to+HDF5+1.12" target="_blank" rel="noreferrer">Migrating from HDF5 1.10 to HDF5 1.12</a><br>
</div>
<div class="gmail_default" style="font-family:monospace,monospace"><br>
</div>
<div class="gmail_default" style="font-family:monospace,monospace">One Program is gdal
which lists hdf5 as an optional REQUIRE.</div>
<div class="gmail_default" style="font-family:monospace,monospace"><br>
</div>
<div class="gmail_default"><font face="monospace,
monospace">I found an </font><font face="monospace">optional
'compatibility' configure option here:</font></div>
<div class="gmail_default"><font face="monospace"><br>
</font></div>
<div class="gmail_default" style="font-family:monospace,monospace"><a href="https://portal.hdfgroup.org/display/HDF5/API+Compatibility+Macros" target="_blank" rel="noreferrer">https://portal.hdfgroup.org/display/HDF5/API+Compatibility+Macros<br>
</a></div>
<div class="gmail_default" style="font-family:monospace,monospace"><br>
</div>
<div class="gmail_default" style="font-family:monospace,monospace">So I added:</div>
<div class="gmail_default" style="font-family:monospace,monospace"><br>
</div>
<div class="gmail_default" style="font-family:monospace,monospace">
<div class="gmail_default"> --with-default-api-version=v110<br>
</div>
<div class="gmail_default"><br>
</div>
</div>
<div class="gmail_default" style="font-family:monospace,monospace">And I rebuilt HDF5.</div>
<div class="gmail_default" style="font-family:monospace,monospace"><br>
</div>
<div class="gmail_default" style="font-family:monospace,monospace">I tried rebuilding
gdal ( where hdf5 is an optional REQUIRE ) and it failed to
compile.<br>
</div>
<div class="gmail_default" style="font-family:monospace,monospace"><br>
</div>
<div class="gmail_default" style="font-family:monospace,monospace">I reverted to hdf5
version 1.10.6 and everything works as expected.<br>
</div>
<div class="gmail_default" style="font-family:monospace,monospace"><br>
</div>
<div class="gmail_default" style="font-family:monospace,monospace">I am not sure how to
proceed because ultimately, proper fixes for all these SBo
Packages will require upstream fixes for the new HDF5 API:</div>
<div class="gmail_default" style="font-family:monospace,monospace"><br>
</div>
<div class="gmail_default"><font face="monospace">#
hoorex -m hdf5</font></div>
<font face="monospace">hdf5 h5utils matio FreeFem openimageio
med mpb gmsh netcdf GMT ITK OTB meep cdo ncview nco paraview
Blender grace</font>
<div><font face="monospace"><br>
</font>
<div class="gmail_default" style="font-family:monospace,monospace">
<div class="gmail_default">Thanks for all your work !<br>
</div>
</div>
<div class="gmail_default" style="font-family:monospace,monospace"><br>
</div>
<div class="gmail_default" style="font-family:monospace,monospace">-- kjh</div>
</div>
</div>
<br>
<fieldset></fieldset>
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